Automatic Posterior Transformation for Likelihood-Free Inference

David S. Greenberg, Marcel Nonnenmacher, Jakob H. Macke
5/17/2019
cs.LGstat.ML

Official code: mackelab/delfi (73 stars, last commit 2020-07-03).

Abstract

How can one perform Bayesian inference on stochastic simulators with intractable likelihoods? A recent approach is to learn the posterior from adaptively proposed simulations using neural network-based conditional density estimators. However, existing methods are limited to a narrow range of proposal distributions or require importance weighting that can limit performance in practice. Here we present automatic posterior transformation (APT), a new sequential neural posterior estimation method for simulation-based inference. APT can modify the posterior estimate using arbitrary, dynamically updated proposals, and is compatible with powerful flow-based density estimators. It is more flexible, scalable and efficient than previous simulation-based inference techniques. APT can operate directly on high-dimensional time series and image data, opening up new applications for likelihood-free inference.

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Code Implementations(1)

mackelab/delfiOfficial100%

Density estimation likelihood-free inference. No longer actively developed see https://github.com/mackelab/sbi instead

7329PythonNov 29, 20176 years agoNOASSERTION
abcbayesian-inferencedensity-estimationlikelihood-freemachine-learning+2 more

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Cite this paper

@article{greenberg2019automatic,
  title  = {Automatic Posterior Transformation for Likelihood-Free Inference},
  author = {David S. Greenberg and Marcel Nonnenmacher and Jakob H. Macke},
  year   = {2019},
  eprint = {1905.07488},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/abs/1905.07488}
}

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