COVID-19 Image Data Collection: Prospective Predictions Are the Future

Joseph Paul Cohen, Paul Morrison, Lan Dao, Karsten Roth, Tim Q Duong +1 more
6/22/2020
q-bio.QMcs.CVcs.LG

Official code: ieee8023/covid-chestxray-dataset (3,060 stars, last commit 2022-08-18). 1 more implementation below.

Abstract

Across the world's coronavirus disease 2019 (COVID-19) hot spots, the need to streamline patient diagnosis and management has become more pressing than ever. As one of the main imaging tools, chest X-rays (CXRs) are common, fast, non-invasive, relatively cheap, and potentially bedside to monitor the progression of the disease. This paper describes the first public COVID-19 image data collection as well as a preliminary exploration of possible use cases for the data. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of COVID-19. It was manually aggregated from publication figures as well as various web based repositories into a machine learning (ML) friendly format with accompanying dataloader code. We collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. We present multiple possible use cases for the data such as predicting the need for the ICU, predicting patient survival, and understanding a patient's trajectory during treatment. Data can be accessed here: https://github.com/ieee8023/covid-chestxray-dataset

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Code Implementations(2)

ieee8023/covid-chestxray-datasetOfficial100%

We are building an open database of COVID-19 cases with chest X-ray or CT images.

3,0601,277Python, JavaScriptFeb 14, 20204 years ago
computed-tomographycomputer-visioncovid-19datasetdeep-learning+1 more
mlmed/torchxrayvisionCommunity100%
PyTorch

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

1,213258Shell, PythonMar 4, 20204 days agoNOASSERTION
chest-radiographschest-xraychest-xray-imagescxrcxr-images+14 more

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Cite this paper

@article{cohen2020covid,
  title  = {COVID-19 Image Data Collection: Prospective Predictions Are the Future},
  author = {Joseph Paul Cohen and Paul Morrison and Lan Dao and Karsten Roth and Tim Q Duong and Marzyeh Ghassemi},
  year   = {2020},
  eprint = {2006.11988},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/abs/2006.11988}
}

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