Bayesian Force Fields from Active Learning for Simulation of Inter-Dimensional Transformation of Stanene

Yu Xie, Jonathan Vandermause, Lixin Sun, Andrea Cepellotti, Boris Kozinsky
8/26/2020
physics.comp-phcond-mat.mtrl-scics.LG

Official code: mir-group/flare (365 stars, MIT, last commit 2026-09-28).

Abstract

We present a way to dramatically accelerate Gaussian process models for interatomic force fields based on many-body kernels by mapping both forces and uncertainties onto functions of low-dimensional features. This allows for automated active learning of models combining near-quantum accuracy, built-in uncertainty, and constant cost of evaluation that is comparable to classical analytical models, capable of simulating millions of atoms. Using this approach, we perform large scale molecular dynamics simulations of the stability of the stanene monolayer. We discover an unusual phase transformation mechanism of 2D stanene, where ripples lead to nucleation of bilayer defects, densification into a disordered multilayer structure, followed by formation of bulk liquid at high temperature or nucleation and growth of the 3D bcc crystal at low temperature. The presented method opens possibilities for rapid development of fast accurate uncertainty-aware models for simulating long-time large-scale dynamics of complex materials.

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Code Implementations(1)

mir-group/flareOfficial100%
MIT

An open-source Python package for creating fast and accurate interatomic potentials.

36578C, C++Aug 30, 20183 weeks agoMIT
kokkos

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Cite this paper

@article{xie2020bayesian,
  title  = {Bayesian Force Fields from Active Learning for Simulation of Inter-Dimensional Transformation of Stanene},
  author = {Yu Xie and Jonathan Vandermause and Lixin Sun and Andrea Cepellotti and Boris Kozinsky},
  year   = {2020},
  eprint = {2008.11796},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/abs/2008.11796}
}

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