Explaining Chest X-ray Pathologies in Natural Language

Maxime Kayser, Cornelius Emde, Oana-Maria Camburu, Guy Parsons, Bartlomiej Papiez +1 more
7/9/2022
cs.CVcs.AIcs.CL

No official code found. Best implementation: maximek3/MIMIC-NLE (21 stars, last commit 2022-07-25).

Abstract

Most deep learning algorithms lack explanations for their predictions, which limits their deployment in clinical practice. Approaches to improve explainability, especially in medical imaging, have often been shown to convey limited information, be overly reassuring, or lack robustness. In this work, we introduce the task of generating natural language explanations (NLEs) to justify predictions made on medical images. NLEs are human-friendly and comprehensive, and enable the training of intrinsically explainable models. To this goal, we introduce MIMIC-NLE, the first, large-scale, medical imaging dataset with NLEs. It contains over 38,000 NLEs, which explain the presence of various thoracic pathologies and chest X-ray findings. We propose a general approach to solve the task and evaluate several architectures on this dataset, including via clinician assessment.

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Code Implementations(1)

maximek3/MIMIC-NLECommunity100%
214PythonJun 22, 20224 years ago

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Cite this paper

@article{kayser2022explaining,
  title  = {Explaining Chest X-ray Pathologies in Natural Language},
  author = {Maxime Kayser and Cornelius Emde and Oana-Maria Camburu and Guy Parsons and Bartlomiej Papiez and Thomas Lukasiewicz},
  year   = {2022},
  eprint = {2207.04343},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2207.04343v1}
}

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