Continuous Spatiotemporal Transformers

Antonio H. O. Fonseca, E. Zappala, J. O. Caro, D. V. Dijk
2/12/2026

No official code found. Best implementation: vandijklab/CST (24 stars, MIT, last commit 2023-05-30).

Abstract

Modeling spatiotemporal dynamical systems is a fundamental challenge in machine learning. Transformer models have been very successful in NLP and computer vision where they provide interpretable representations of data. However, a limitation of transformers in modeling continuous dynamical systems is that they are fundamentally discrete time and space models and thus have no guarantees regarding continuous sampling. To address this challenge, we present the Continuous Spatiotemporal Transformer (CST), a new transformer architecture that is designed for the modeling of continuous systems. This new framework guarantees a continuous and smooth output via optimization in Sobolev space. We benchmark CST against traditional transformers as well as other spatiotemporal dynamics modeling methods and achieve superior performance in a number of tasks on synthetic and real systems, including learning brain dynamics from calcium imaging data.

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Code Implementations(1)

vandijklab/CSTCommunity100%
MIT

Continuous Spatiotemporal Transformer

245Python, Jupyter NotebookMay 30, 20233 years agoMIT

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Cite this paper

@article{fonseca2026continuous,
  title  = {Continuous Spatiotemporal Transformers},
  author = {Antonio H. O. Fonseca and E. Zappala and J. O. Caro and D. V. Dijk},
  year   = {2026},
  eprint = {2301.13338},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/pdf/2301.13338},
  journal = {ICML 2023 2023}
}

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