A Spectral Theory of Neural Prediction and Alignment

Abdulkadir Canatar, J. Feather, Albert J. Wakhloo, SueYeon Chung
2/12/2026

No official code found. Best implementation: chung-neuroai-lab/SNAP (5 stars, MIT, last commit 2023-11-12).

Abstract

The representations of neural networks are often compared to those of biological systems by performing regression between the neural network responses and those measured from biological systems. Many different state-of-the-art deep neural networks yield similar neural predictions, but it remains unclear how to differentiate among models that perform equally well at predicting neural responses. To gain insight into this, we use a recent theoretical framework that relates the generalization error from regression to the spectral properties of the model and the target. We apply this theory to the case of regression between model activations and neural responses and decompose the neural prediction error in terms of the model eigenspectra, alignment of model eigenvectors and neural responses, and the training set size. Using this decomposition, we introduce geometrical measures to interpret the neural prediction error. We test a large number of deep neural networks that predict visual cortical activity and show that there are multiple types of geometries that result in low neural prediction error as measured via regression. The work demonstrates that carefully decomposing representational metrics can provide interpretability of how models are capturing neural activity and points the way towards improved models of neural activity.

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MIT

Repo for NeurIPS 2023 Spotlight paper "A Spectral Theory of Neural Prediction and Alignment." Abdulkadir Canatar∗, Jenelle Feather∗, Albert J. Wakhloo, & SueYeon Chung. (∗equal contribution)

56Python, Jupyter NotebookOct 26, 20232 years agoMIT

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Cite this paper

@article{canatar2026spectral,
  title  = {A Spectral Theory of Neural Prediction and Alignment},
  author = {Abdulkadir Canatar and J. Feather and Albert J. Wakhloo and SueYeon Chung},
  year   = {2026},
  eprint = {2309.12821},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/pdf/2309.12821},
  journal = {NEURIPS 2023 2023}
}

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