Interpreting Time Series Transformer Models and Sensitivity Analysis of Population Age Groups to COVID-19 Infections

Md Khairul Islam, Tyler Valentine, Timothy Joowon Sue, Ayush Karmacharya, Luke Neil Benham +3 more
1/26/2024
cs.LGcs.AIq-bio.PE

No official code found. Best implementation: UVA-MLSys/COVID-19-age-groups (3 stars, Apache-2.0, last commit 2025-04-10).

Abstract

Interpreting deep learning time series models is crucial in understanding the model's behavior and learning patterns from raw data for real-time decision-making. However, the complexity inherent in transformer-based time series models poses challenges in explaining the impact of individual features on predictions. In this study, we leverage recent local interpretation methods to interpret state-of-the-art time series models. To use real-world datasets, we collected three years of daily case data for 3,142 US counties. Firstly, we compare six transformer-based models and choose the best prediction model for COVID-19 infection. Using 13 input features from the last two weeks, we can predict the cases for the next two weeks. Secondly, we present an innovative way to evaluate the prediction sensitivity to 8 population age groups over highly dynamic multivariate infection data. Thirdly, we compare our proposed perturbation-based interpretation method with related work, including a total of eight local interpretation methods. Finally, we apply our framework to traffic and electricity datasets, demonstrating that our approach is generic and can be applied to other time-series domains.

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Code Implementations(1)

Apache-2.0

Interpreting age groups impact on COVID-19 using deep learning timeseries models

31Shell, PythonAug 20, 20231 years agoApache-2.0
covid-19deep-learningforecastinginterpretationlocal-interpretation+2 more

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Cite this paper

@article{islam2024interpreting,
  title  = {Interpreting Time Series Transformer Models and Sensitivity Analysis of Population Age Groups to COVID-19 Infections},
  author = {Md Khairul Islam and Tyler Valentine and Timothy Joowon Sue and Ayush Karmacharya and Luke Neil Benham and Zhengguang Wang and Kingsley Kim and Judy Fox},
  year   = {2024},
  eprint = {2401.15119},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2401.15119v1}
}

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