Automated detection of motion artifacts in brain MR images using deep learning and explainable artificial intelligence

Marina Manso Jimeno, Keerthi Sravan Ravi, Maggie Fung, John Thomas Vaughan,, Sairam Geethanath
2/13/2024
cs.CVcs.LG

No confident code implementation found for this paper.

Abstract

Quality assessment, including inspecting the images for artifacts, is a critical step during MRI data acquisition to ensure data quality and downstream analysis or interpretation success. This study demonstrates a deep learning model to detect rigid motion in T1-weighted brain images. We leveraged a 2D CNN for three-class classification and tested it on publicly available retrospective and prospective datasets. Grad-CAM heatmaps enabled the identification of failure modes and provided an interpretation of the model's results. The model achieved average precision and recall metrics of 85% and 80% on six motion-simulated retrospective datasets. Additionally, the model's classifications on the prospective dataset showed a strong inverse correlation (-0.84) compared to average edge strength, an image quality metric indicative of motion. This model is part of the ArtifactID tool, aimed at inline automatic detection of Gibbs ringing, wrap-around, and motion artifacts. This tool automates part of the time-consuming QA process and augments expertise on-site, particularly relevant in low-resource settings where local MR knowledge is scarce.

View on arXivView PDF

Code Implementations

No confident code match yet

We couldn't find an author-owned or strongly-evidenced community implementation for this paper. Any repos shown below are weak matches — verify before relying on them.

No code implementations found yet.

Know of an implementation? Let us know in the comments below!

Similar Papers

Cite this paper

@article{jimeno2024automated,
  title  = {Automated detection of motion artifacts in brain MR images using deep learning and explainable artificial intelligence},
  author = {Marina Manso Jimeno and Keerthi Sravan Ravi and Maggie Fung and John Thomas Vaughan, and Sairam Geethanath},
  year   = {2024},
  eprint = {2402.08749},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2402.08749v1}
}

Add a badge to your README

Shows whether official code is linked for this paper.

Code of Paper badge
[![Code of Paper](https://codeofpaper.com/badge/2402.08749.svg)](https://codeofpaper.com/paper/2402.08749)

Discussion