Deep learning-driven pulmonary artery and vein segmentation reveals demography-associated vasculature anatomical differences

Yuetan Chu, Gongning Luo, Longxi Zhou, Shaodong Cao, Guolin Ma +11 more
4/11/2024
cs.CV

No official code found. Best implementation: Arturia-Pendragon-Iris/HiPaS_AV_Segmentation (66 stars, MIT, last commit 2026-03-25).

Abstract

Pulmonary artery-vein segmentation is crucial for disease diagnosis and surgical planning and is traditionally achieved by Computed Tomography Pulmonary Angiography (CTPA). However, concerns regarding adverse health effects from contrast agents used in CTPA have constrained its clinical utility. In contrast, identifying arteries and veins using non-contrast CT, a conventional and low-cost clinical examination routine, has long been considered impossible. Here we propose a High-abundant Pulmonary Artery-vein Segmentation (HiPaS) framework achieving accurate artery-vein segmentation on both non-contrast CT and CTPA across various spatial resolutions. HiPaS first performs spatial normalization on raw CT volumes via a super-resolution module, and then iteratively achieves segmentation results at different branch levels by utilizing the lower-level vessel segmentation as a prior for higher-level vessel segmentation. We trained and validated HiPaS on our established multi-centric dataset comprising 1,073 CT volumes with meticulous manual annotations. Both quantitative experiments and clinical evaluation demonstrated the superior performance of HiPaS, achieving an average dice score of 91.8% and a sensitivity of 98.0%. Further experiments showed the non-inferiority of HiPaS segmentation on non-contrast CT compared to segmentation on CTPA. Employing HiPaS, we have conducted an anatomical study of pulmonary vasculature on 11,784 participants in China (six sites), discovering a new association of pulmonary vessel anatomy with sex, age, and disease states: vessel abundance suggests a significantly higher association with females than males with slightly decreasing with age, and is also influenced by certain diseases, under the controlling of lung volumes.

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Code Implementations(1)

MIT

The supplementary code for the pulmonary artery-vein segmentation with various inter-slice thickness

6610Python, Jupyter NotebookSep 11, 20227 months agoMIT

Cite this paper

@article{chu2024deep,
  title  = {Deep learning-driven pulmonary artery and vein segmentation reveals demography-associated vasculature anatomical differences},
  author = {Yuetan Chu and Gongning Luo and Longxi Zhou and Shaodong Cao and Guolin Ma and Xianglin Meng and Juexiao Zhou and Changchun Yang and Dexuan Xie and Dan Mu and Ricardo Henao and Gianluca Setti and Xigang Xiao and Lianming Wu and Zhaowen Qiu and Xin Gao},
  year   = {2024},
  eprint = {2404.07671},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2404.07671v2}
}

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