Unifying Interpretability and Explainability for Alzheimer's Disease Progression Prediction

Raja Farrukh Ali, Stephanie Milani, John Woods, Emmanuel Adenij, Ayesha Farooq +3 more
6/11/2024
cs.LG

Official code: rfali/xrlad (10 stars, Apache-2.0, last commit 2024-06-14).

Abstract

Reinforcement learning (RL) has recently shown promise in predicting Alzheimer's disease (AD) progression due to its unique ability to model domain knowledge. However, it is not clear which RL algorithms are well-suited for this task. Furthermore, these methods are not inherently explainable, limiting their applicability in real-world clinical scenarios. Our work addresses these two important questions. Using a causal, interpretable model of AD, we first compare the performance of four contemporary RL algorithms in predicting brain cognition over 10 years using only baseline (year 0) data. We then apply SHAP (SHapley Additive exPlanations) to explain the decisions made by each algorithm in the model. Our approach combines interpretability with explainability to provide insights into the key factors influencing AD progression, offering both global and individual, patient-level analysis. Our findings show that only one of the RL methods is able to satisfactorily model disease progression, but the post-hoc explanations indicate that all methods fail to properly capture the importance of amyloid accumulation, one of the pathological hallmarks of Alzheimer's disease. Our work aims to merge predictive accuracy with transparency, assisting clinicians and researchers in enhancing disease progression modeling for informed healthcare decisions. Code is available at https://github.com/rfali/xrlad.

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rfali/xrladOfficial100%
Apache-2.0

Unifying Interpretability and Explainability for Alzheimer’s Disease Progression Prediction

100PythonJun 12, 20242 years agoApache-2.0

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Cite this paper

@article{ali2024unifying,
  title  = {Unifying Interpretability and Explainability for Alzheimer's Disease Progression Prediction},
  author = {Raja Farrukh Ali and Stephanie Milani and John Woods and Emmanuel Adenij and Ayesha Farooq and Clayton Mansel and Jeffrey Burns and William Hsu},
  year   = {2024},
  eprint = {2406.07777},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2406.07777v1}
}

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