URCDM: Ultra-Resolution Image Synthesis in Histopathology

Sarah Cechnicka, James Ball, Matthew Baugh, Hadrien Reynaud, Naomi Simmonds +4 more
7/18/2024
eess.IVcs.CV

No official code found. Best implementation: scechnicka/URCDM (2 stars, last commit 2024-10-06).

Abstract

Diagnosing medical conditions from histopathology data requires a thorough analysis across the various resolutions of Whole Slide Images (WSI). However, existing generative methods fail to consistently represent the hierarchical structure of WSIs due to a focus on high-fidelity patches. To tackle this, we propose Ultra-Resolution Cascaded Diffusion Models (URCDMs) which are capable of synthesising entire histopathology images at high resolutions whilst authentically capturing the details of both the underlying anatomy and pathology at all magnification levels. We evaluate our method on three separate datasets, consisting of brain, breast and kidney tissue, and surpass existing state-of-the-art multi-resolution models. Furthermore, an expert evaluation study was conducted, demonstrating that URCDMs consistently generate outputs across various resolutions that trained evaluators cannot distinguish from real images. All code and additional examples can be found on GitHub.

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scechnicka/URCDMCommunity100%

URCDM: Ultra-Resolution Image Synthesis in Histopathology code used for

21PythonJul 8, 20242 years ago

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Cite this paper

@article{cechnicka2024urcdm,
  title  = {URCDM: Ultra-Resolution Image Synthesis in Histopathology},
  author = {Sarah Cechnicka and James Ball and Matthew Baugh and Hadrien Reynaud and Naomi Simmonds and Andrew P. T. Smith and Catherine Horsfield and Candice Roufosse and Bernhard Kainz},
  year   = {2024},
  eprint = {2407.13277},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2407.13277v1}
}

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