Near-Isotropic Sub-Ångstrom 3D Resolution Phase Contrast Imaging Achieved by End-to-End Ptychographic Electron Tomography

Shengboy You, Andrey Romanov, Philipp Pelz
7/28/2024
physics.comp-phcond-mat.mtrl-scics.LG

No official code found. Best implementation: ECLIPSE-Lab/End2EndPtychoTomo_code (10 stars, MIT, last commit 2024-12-16). 1 more below.

Abstract

Three-dimensional atomic resolution imaging using transmission electron microscopes is a unique capability that requires challenging experiments. Linear electron tomography methods are limited by the missing wedge effect, requiring a high tilt range. Multislice ptychography can achieve deep sub-Ångstrom resolution in the transverse direction, but the depth resolution is limited to 2 to 3 nanometers. In this paper, we propose and demonstrate an end-to-end approach to reconstructing the electrostatic potential volume of the sample directly from the 4D-STEM datasets. End-to-end multi-slice ptychographic tomography recovers several slices at each tomography tilt angle and compensates for the missing wedge effect. The algorithm is initially tested in simulation with a Pt@$\mathrm{Al_2O_3}$ core-shell nanoparticle, where both heavy and light atoms are recovered in 3D from an unaligned 4D-STEM tilt series with a restricted tilt range of 90 degrees. We also demonstrate the algorithm experimentally, recovering a Te nanoparticle with sub-Ångstrom resolution.

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Code Implementations(2)

MIT

Code for the paper: "Near-Isotropic Sub-Ångstrom 3D Resolution Phase Contrast Imaging Achieved by End-to-End Ptychographic Electron Tomography"

104PythonDec 2, 20241 years agoMIT
3d-reconstructionelectron-microscopyptychographytomography

project page for ¨Near-Isotropic Sub-Ångstrom 3D Resolution Phase Contrast Imaging Achieved by End-to-End Ptychographic Electron Tomography"

01CSS, LuaDec 2, 20241 years ago

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Cite this paper

@article{you2024nearisotropic,
  title  = {Near-Isotropic Sub-Ångstrom 3D Resolution Phase Contrast Imaging Achieved by End-to-End Ptychographic Electron Tomography},
  author = {Shengboy You and Andrey Romanov and Philipp Pelz},
  year   = {2024},
  eprint = {2407.19407},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2407.19407v1}
}

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