On the good reliability of an interval-based metric to validate prediction uncertainty for machine learning regression tasks

Abstract

This short study presents an opportunistic approach to a (more) reliable validation method for prediction uncertainty average calibration. Considering that variance-based calibration metrics (ZMS, NLL, RCE...) are quite sensitive to the presence of heavy tails in the uncertainty and error distributions, a shift is proposed to an interval-based metric, the Prediction Interval Coverage Probability (PICP). It is shown on a large ensemble of molecular properties datasets that (1) sets of z-scores are well represented by Student's-$t(ν)$ distributions, $ν$ being the number of degrees of freedom; (2) accurate estimation of 95 $\%$ prediction intervals can be obtained by the simple $2σ$ rule for $ν>3$; and (3) the resulting PICPs are more quickly and reliably tested than variance-based calibration metrics. Overall, this method enables to test 20 $\%$ more datasets than ZMS testing. Conditional calibration is also assessed using the PICP approach.