MitoSeg: Mitochondria Segmentation Tool

Faris Serdar Taşel, Efe Çiftci
9/18/2024
cs.CV

No official code found. Best implementation: fstasel/mitoseg (1 star, GPL-3.0, last commit 2025-02-09).

Abstract

Recent studies suggest a potential link between the physical structure of mitochondria and neurodegenerative diseases. With advances in Electron Microscopy techniques, it has become possible to visualize the boundary and internal membrane structures of mitochondria in detail. It is crucial to automatically segment mitochondria from these images to investigate the relationship between mitochondria and diseases. In this paper, we present a software solution for mitochondrial segmentation, highlighting mitochondria boundaries in electron microscopy tomography images and generating corresponding 3D meshes.

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Code Implementations(1)

fstasel/mitosegCommunity100%
GPL-3.0

Mitochondria Segmentation Tool

11C, C++Jul 12, 20241 years agoGPL-3.0
active-contour-modelcurve-fittingimage-processingmicroscopy-imagessegmentation+1 more

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Cite this paper

@article{tael2024mitoseg,
  title  = {MitoSeg: Mitochondria Segmentation Tool},
  author = {Faris Serdar Taşel and Efe Çiftci},
  year   = {2024},
  eprint = {2409.11974},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2409.11974v1}
}

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