Anatomical feature-prioritized loss for enhanced MR to CT translation

Arthur Longuefosse, Baudouin Denis de Senneville, Gael Dournes, Ilyes Benlala, Pascal Desbarats +1 more
10/14/2024
eess.IVcs.CV

No official code found. Best implementation: Phyrise/nnUNet_translation (31 stars, Apache-2.0, last commit 2026-01-28).

Abstract

In medical image synthesis, the precision of localized structural details is crucial, particularly when addressing specific clinical requirements such as the identification and measurement of fine structures. Traditional methods for image translation and synthesis are generally optimized for global image reconstruction but often fall short in providing the finesse required for detailed local analysis. This study represents a step toward addressing this challenge by introducing a novel anatomical feature-prioritized (AFP) loss function into the synthesis process. This method enhances reconstruction by focusing on clinically significant structures, utilizing features from a pre-trained model designed for a specific downstream task, such as the segmentation of particular anatomical regions. The AFP loss function can replace or complement global reconstruction methods, ensuring a balanced emphasis on both global image fidelity and local structural details. Various implementations of this loss function are explored, including its integration into different synthesis networks such as GAN-based and CNN-based models. Our approach is applied and evaluated in two contexts: lung MR to CT translation, focusing on high-quality reconstruction of bronchial structures, using a private dataset; and pelvis MR to CT synthesis, targeting the accurate representation of organs and muscles, utilizing a public dataset from the Synthrad2023 challenge. We leverage embeddings from pre-trained segmentation models specific to these anatomical regions to demonstrate the capability of the AFP loss to prioritize and accurately reconstruct essential features. This tailored approach shows promising potential for enhancing the specificity and practicality of medical image synthesis in clinical applications.

View on arXivView PDF

Code Implementations(1)

Apache-2.0

nnUNetv2 adapted for image-to-image translation

316Python, Jupyter NotebookMay 24, 20248 months agoApache-2.0

Similar Papers

Cite this paper

@article{longuefosse2024anatomical,
  title  = {Anatomical feature-prioritized loss for enhanced MR to CT translation},
  author = {Arthur Longuefosse and Baudouin Denis de Senneville and Gael Dournes and Ilyes Benlala and Pascal Desbarats and Fabien Baldacci},
  year   = {2024},
  eprint = {2410.10328},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2410.10328v3}
}

Add a badge to your README

Shows whether official code is linked for this paper.

Code of Paper badge
[![Code of Paper](https://codeofpaper.com/badge/2410.10328.svg)](https://codeofpaper.com/paper/2410.10328)

Discussion