SpineFM: Leveraging Foundation Models for Automatic Spine X-ray Segmentation

Samuel J. Simons, Bartłomiej W. Papież
11/1/2024
eess.IVcs.CV

No official code found. Best implementation: sjsimons/SpineFM (10 stars, GPL-3.0, last commit 2025-03-04).

Abstract

This paper introduces SpineFM, a novel pipeline that achieves state-of-the-art performance in the automatic segmentation and identification of vertebral bodies in cervical and lumbar spine radiographs. SpineFM leverages the regular geometry of the spine, employing a novel inductive process to sequentially infer the location of each vertebra along the spinal column. Vertebrae are segmented using Medical-SAM-Adaptor, a robust foundation model that diverges from commonly used CNN-based models. We achieved outstanding results on two publicly available spine X-Ray datasets, with successful identification of 97.8\% and 99.6\% of annotated vertebrae, respectively. Of which, our segmentation reached an average Dice of 0.942 and 0.921, surpassing previous state-of-the-art methods.

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Code Implementations(1)

sjsimons/SpineFMCommunity100%
GPL-3.0
105Python, Jupyter NotebookNov 8, 20241 years agoGPL-3.0

Cite this paper

@article{simons2024spinefm,
  title  = {SpineFM: Leveraging Foundation Models for Automatic Spine X-ray Segmentation},
  author = {Samuel J. Simons and Bartłomiej W. Papież},
  year   = {2024},
  eprint = {2411.00326},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2411.00326v2}
}

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