ChemAgent: Self-updating Library in Large Language Models Improves Chemical Reasoning

Xiangru Tang, Tianyu Hu, Muyang Ye, Yanjun Shao, Xunjian Yin +7 more
1/11/2025
cs.CLcs.AI

Official code: gersteinlab/ChemAgent (91 stars, last commit 2025-07-31).

Abstract

Chemical reasoning usually involves complex, multi-step processes that demand precise calculations, where even minor errors can lead to cascading failures. Furthermore, large language models (LLMs) encounter difficulties handling domain-specific formulas, executing reasoning steps accurately, and integrating code effectively when tackling chemical reasoning tasks. To address these challenges, we present ChemAgent, a novel framework designed to improve the performance of LLMs through a dynamic, self-updating library. This library is developed by decomposing chemical tasks into sub-tasks and compiling these sub-tasks into a structured collection that can be referenced for future queries. Then, when presented with a new problem, ChemAgent retrieves and refines pertinent information from the library, which we call memory, facilitating effective task decomposition and the generation of solutions. Our method designs three types of memory and a library-enhanced reasoning component, enabling LLMs to improve over time through experience. Experimental results on four chemical reasoning datasets from SciBench demonstrate that ChemAgent achieves performance gains of up to 46% (GPT-4), significantly outperforming existing methods. Our findings suggest substantial potential for future applications, including tasks such as drug discovery and materials science. Our code can be found at https://github.com/gersteinlab/chemagent

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Code Implementations(1)

[ICLR 2025]ChemAgent: Self-updating Library in Large Language Models Improves Chemical Reasoning https://arxiv.org/abs/2501.06590

9112PythonNov 6, 20241 years ago

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Cite this paper

@article{tang2025chemagent,
  title  = {ChemAgent: Self-updating Library in Large Language Models Improves Chemical Reasoning},
  author = {Xiangru Tang and Tianyu Hu and Muyang Ye and Yanjun Shao and Xunjian Yin and Siru Ouyang and Wangchunshu Zhou and Pan Lu and Zhuosheng Zhang and Yilun Zhao and Arman Cohan and Mark Gerstein},
  year   = {2025},
  eprint = {2501.06590},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2501.06590v1}
}

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