Learning the Electronic Hamiltonian of Large Atomic Structures

C. H. Xia, M. Kaniselvan, A. Ziogas, Marko Mladenovi'c, Rayen Mahjoub +2 more
2/14/2026

No official code found. Best implementation: chexia8/large_atomic_structures (4 stars, BSD-3-Clause, last commit 2026-01-01).

Abstract

Graph neural networks (GNNs) have shown promise in learning the ground-state electronic properties of materials, subverting ab initio density functional theory (DFT) calculations when the underlying lattices can be represented as small and/or repeatable unit cells (i.e., molecules and periodic crystals). Realistic systems are, however, non-ideal and generally characterized by higher structural complexity. As such, they require large (10+ Angstroms) unit cells and thousands of atoms to be accurately described. At these scales, DFT becomes computationally prohibitive, making GNNs especially attractive. In this work, we present a strictly local equivariant GNN capable of learning the electronic Hamiltonian (H) of realistically extended materials. It incorporates an augmented partitioning approach that enables training on arbitrarily large structures while preserving local atomic environments beyond boundaries. We demonstrate its capabilities by predicting the electronic Hamiltonian of various systems with up to 3,000 nodes (atoms), 500,000+ edges, ~28 million orbital interactions (nonzero entries of H), and $\leq$0.53% error in the eigenvalue spectra. Our work expands the applicability of current electronic property prediction methods to some of the most challenging cases encountered in computational materials science, namely systems with disorder, interfaces, and defects.

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Code Implementations(1)

BSD-3-Clause

Official code implementation of "Learning the Electronic Hamiltonian of Large Atomic Structures" (ICML 2025)

41PythonMay 19, 20259 months agoBSD-3-Clause

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Cite this paper

@article{xia2026learning,
  title  = {Learning the Electronic Hamiltonian of Large Atomic Structures},
  author = {C. H. Xia and M. Kaniselvan and A. Ziogas and Marko Mladenovi'c and Rayen Mahjoub and A. Maeder and Mathieu Luisier},
  year   = {2026},
  eprint = {2501.19110},
  archivePrefix = {arXiv},
  url    = {https://arxiv.org/abs/2501.19110},
  journal = {ICML 2025 2025}
}

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