AutoMedPrompt: A New Framework for Optimizing LLM Medical Prompts Using Textual Gradients

Sean Wu, Michael Koo, Fabien Scalzo, Ira Kurtz
2/21/2025
cs.CL

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Abstract

Large language models (LLMs) have demonstrated increasingly sophisticated performance in medical and other fields of knowledge. Traditional methods of creating specialist LLMs require extensive fine-tuning and training of models on large datasets. Recently, prompt engineering, instead of fine-tuning, has shown potential to boost the performance of general foundation models. However, prompting methods such as chain-of-thought (CoT) may not be suitable for all subspecialty, and k-shot approaches may introduce irrelevant tokens into the context space. We present AutoMedPrompt, which explores the use of textual gradients to elicit medically relevant reasoning through system prompt optimization. AutoMedPrompt leverages TextGrad's automatic differentiation via text to improve the ability of general foundation LLMs. We evaluated AutoMedPrompt on Llama 3, an open-source LLM, using several QA benchmarks, including MedQA, PubMedQA, and the nephrology subspecialty-specific NephSAP. Our results show that prompting with textual gradients outperforms previous methods on open-source LLMs and surpasses proprietary models such as GPT-4, Claude 3 Opus, and Med-PaLM 2. AutoMedPrompt sets a new state-of-the-art (SOTA) performance on PubMedQA with an accuracy of 82.6$\%$, while also outperforming previous prompting strategies on open-sourced models for MedQA (77.7$\%$) and NephSAP (63.8$\%$).

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@article{wu2025automedprompt,
  title  = {AutoMedPrompt: A New Framework for Optimizing LLM Medical Prompts Using Textual Gradients},
  author = {Sean Wu and Michael Koo and Fabien Scalzo and Ira Kurtz},
  year   = {2025},
  eprint = {2502.15944},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2502.15944v1}
}

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