STELLA: Self-Evolving LLM Agent for Biomedical Research

Ruofan Jin, Zaixi Zhang, Mengdi Wang, Le Cong
7/1/2025
cs.AIcs.CLq-bio.BM

No official code found. Best implementation: zaixizhang/STELLA (154 stars, Apache-2.0, last commit 2026-04-05). 1 more below.

Abstract

The rapid growth of biomedical data, tools, and literature has created a fragmented research landscape that outpaces human expertise. While AI agents offer a solution, they typically rely on static, manually curated toolsets, limiting their ability to adapt and scale. Here, we introduce STELLA, a self-evolving AI agent designed to overcome these limitations. STELLA employs a multi-agent architecture that autonomously improves its own capabilities through two core mechanisms: an evolving Template Library for reasoning strategies and a dynamic Tool Ocean that expands as a Tool Creation Agent automatically discovers and integrates new bioinformatics tools. This allows STELLA to learn from experience. We demonstrate that STELLA achieves state-of-the-art accuracy on a suite of biomedical benchmarks, scoring approximately 26\% on Humanity's Last Exam: Biomedicine, 54\% on LAB-Bench: DBQA, and 63\% on LAB-Bench: LitQA, outperforming leading models by up to 6 percentage points. More importantly, we show that its performance systematically improves with experience; for instance, its accuracy on the Humanity's Last Exam benchmark almost doubles with increased trials. STELLA represents a significant advance towards AI Agent systems that can learn and grow, dynamically scaling their expertise to accelerate the pace of biomedical discovery.

View on arXivView PDF

Code Implementations(2)

STELLA: Self-Evolving LLM Agent for Biomedical Research

20PythonAug 16, 20251 years ago
zaixizhang/STELLACommunity70%
Apache-2.0

STELLA: Self-Evolving LLM Agent for Biomedical Research

15421Python, DockerfileJul 4, 20256 months agoApache-2.0

Similar Papers

Cite this paper

@article{jin2025stella,
  title  = {STELLA: Self-Evolving LLM Agent for Biomedical Research},
  author = {Ruofan Jin and Zaixi Zhang and Mengdi Wang and Le Cong},
  year   = {2025},
  eprint = {2507.02004},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2507.02004v1}
}

Add a badge to your README

Shows whether official code is linked for this paper.

Code of Paper badge
[![Code of Paper](https://codeofpaper.com/badge/2507.02004.svg)](https://codeofpaper.com/paper/2507.02004)

Discussion