CM-UNet: A Self-Supervised Learning-Based Model for Coronary Artery Segmentation in X-Ray Angiography

Camille Challier, Xiaowu Sun, Thabo Mahendiran, Ortal Senouf, Bernard De Bruyne +6 more
7/22/2025
q-bio.QMcs.LG

Official code: CamilleChallier/Contrastive-Masked-UNet (9 stars, last commit 2025-12-09).

Abstract

Accurate segmentation of coronary arteries remains a significant challenge in clinical practice, hindering the ability to effectively diagnose and manage coronary artery disease. The lack of large, annotated datasets for model training exacerbates this issue, limiting the development of automated tools that could assist radiologists. To address this, we introduce CM-UNet, which leverages self-supervised pre-training on unannotated datasets and transfer learning on limited annotated data, enabling accurate disease detection while minimizing the need for extensive manual annotations. Fine-tuning CM-UNet with only 18 annotated images instead of 500 resulted in a 15.2% decrease in Dice score, compared to a 46.5% drop in baseline models without pre-training. This demonstrates that self-supervised learning can enhance segmentation performance and reduce dependence on large datasets. This is one of the first studies to highlight the importance of self-supervised learning in improving coronary artery segmentation from X-ray angiography, with potential implications for advancing diagnostic accuracy in clinical practice. By enhancing segmentation accuracy in X-ray angiography images, the proposed approach aims to improve clinical workflows, reduce radiologists' workload, and accelerate disease detection, ultimately contributing to better patient outcomes. The source code is publicly available at https://github.com/CamilleChallier/Contrastive-Masked-UNet.

View on arXivView PDF

Code Implementations(1)

90Shell, PythonJan 30, 202510 months ago

Similar Papers

Cite this paper

@article{challier2025cmunet,
  title  = {CM-UNet: A Self-Supervised Learning-Based Model for Coronary Artery Segmentation in X-Ray Angiography},
  author = {Camille Challier and Xiaowu Sun and Thabo Mahendiran and Ortal Senouf and Bernard De Bruyne and Denise Auberson and Olivier Müller and Stephane Fournier and Pascal Frossard and Emmanuel Abbé and Dorina Thanou},
  year   = {2025},
  eprint = {2507.17779},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2507.17779v1}
}

Add a badge to your README

Shows whether official code is linked for this paper.

Code of Paper badge
[![Code of Paper](https://codeofpaper.com/badge/2507.17779.svg)](https://codeofpaper.com/paper/2507.17779)

Discussion