Graph Learning via Logic-Based Weisfeiler-Leman Variants and Tabularization

Reijo Jaakkola, Tomi Janhunen, Antti Kuusisto, Magdalena Ortiz, Matias Selin +1 more
8/14/2025
cs.LG

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Abstract

We present a novel approach for graph classification based on tabularizing graph data via variants of the Weisfeiler-Leman algorithm and then applying methods for tabular data. We investigate a comprehensive class of Weisfeiler-Leman variants obtained by modifying the underlying logical framework and establish a precise theoretical characterization of their expressive power. We then test two selected variants on twelve benchmark datasets that span a range of different domains. The experiments demonstrate that our approach matches the accuracy of state-of-the-art graph neural networks and graph kernels while being more time or memory efficient, depending on the dataset. We also briefly discuss directly extracting interpretable modal logic formulas from graph datasets.

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Cite this paper

@article{jaakkola2025graph,
  title  = {Graph Learning via Logic-Based Weisfeiler-Leman Variants and Tabularization},
  author = {Reijo Jaakkola and Tomi Janhunen and Antti Kuusisto and Magdalena Ortiz and Matias Selin and Mantas Šimkus},
  year   = {2025},
  eprint = {2508.10651},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2508.10651v1}
}

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