Visualization and Analysis of the Loss Landscape in Graph Neural Networks

Samir Moustafa, Lorenz Kummer, Simon Fetzel, Nils M. Kriege, Wilfried N. Gansterer
9/15/2025
cs.LG

No official code found. Best implementation: SamirMoustafa/torch-loss-landscape (2 stars, last commit 2025-08-25).

Abstract

Graph Neural Networks (GNNs) are powerful models for graph-structured data, with broad applications. However, the interplay between GNN parameter optimization, expressivity, and generalization remains poorly understood. We address this by introducing an efficient learnable dimensionality reduction method for visualizing GNN loss landscapes, and by analyzing the effects of over-smoothing, jumping knowledge, quantization, sparsification, and preconditioner on GNN optimization. Our learnable projection method surpasses the state-of-the-art PCA-based approach, enabling accurate reconstruction of high-dimensional parameters with lower memory usage. We further show that architecture, sparsification, and optimizer's preconditioning significantly impact the GNN optimization landscape and their training process and final prediction performance. These insights contribute to developing more efficient designs of GNN architectures and training strategies.

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Code Implementations(1)

The official implementation for the paper S. Moustafa, L. Kummer, S. Fetzel, N. Kriege and W. N. Gansterer, "Visualization and Analysis of the Loss Landscape in Graph Neural Networks," in Neural Networks for Graphs and Beyond Special Session of the 34th International Conference on Artificial Neural Networks (ICANN 2025).

20PythonJul 10, 20231 years ago

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Cite this paper

@article{moustafa2025visualization,
  title  = {Visualization and Analysis of the Loss Landscape in Graph Neural Networks},
  author = {Samir Moustafa and Lorenz Kummer and Simon Fetzel and Nils M. Kriege and Wilfried N. Gansterer},
  year   = {2025},
  eprint = {2509.11792},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2509.11792v1}
}

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