An Investigation of Memorization Risk in Healthcare Foundation Models

Sana Tonekaboni, Lena Stempfle, Adibvafa Fallahpour, Walter Gerych, Marzyeh Ghassemi
10/14/2025
cs.LG

No official code found. Best implementation: sanatonek/EHR-FM_memorization (8 stars, last commit 2026-01-06).

Abstract

Foundation models trained on large-scale de-identified electronic health records (EHRs) hold promise for clinical applications. However, their capacity to memorize patient information raises important privacy concerns. In this work, we introduce a suite of black-box evaluation tests to assess privacy-related memorization risks in foundation models trained on structured EHR data. Our framework includes methods for probing memorization at both the embedding and generative levels, and aims to distinguish between model generalization and harmful memorization in clinically relevant settings. We contextualize memorization in terms of its potential to compromise patient privacy, particularly for vulnerable subgroups. We validate our approach on a publicly available EHR foundation model and release an open-source toolkit to facilitate reproducible and collaborative privacy assessments in healthcare AI.

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An Investigation of Memorization Risk in Healthcare Foundation Models (NeurIPS 2025)

81Python, Jupyter NotebookJan 29, 20259 months ago

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Cite this paper

@article{tonekaboni2025investigation,
  title  = {An Investigation of Memorization Risk in Healthcare Foundation Models},
  author = {Sana Tonekaboni and Lena Stempfle and Adibvafa Fallahpour and Walter Gerych and Marzyeh Ghassemi},
  year   = {2025},
  eprint = {2510.12950},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2510.12950v1}
}

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