From Laboratory to Real-World Applications: Benchmarking Agentic Code Reasoning at the Repository Level

Jia Li, Yuxin Su, Michael R. Lyu
1/7/2026
cs.SEcs.AI

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Abstract

As large language models (LLMs) evolve into autonomous agents, evaluating repository-level reasoning, the ability to maintain logical consistency across massive, real-world, interdependent file systems, has become critical. Current benchmarks typically fluctuate between isolated code snippets and black-box evaluations. We present RepoReason, a white-box diagnostic benchmark centered on abductive assertion verification. To eliminate memorization while preserving authentic logical depth, we implement an execution-driven mutation framework that utilizes the environment as a semantic oracle to regenerate ground-truth states. Furthermore, we establish a fine-grained diagnostic system using dynamic program slicing, quantifying reasoning via three orthogonal metrics: $ESV$ (reading load), $MCL$ (simulation depth), and $DFI$ (integration width). Comprehensive evaluations of frontier models (e.g., Claude-4.5-Sonnet, DeepSeek-v3.1-Terminus) reveal a prevalent aggregation deficit, where integration width serves as the primary cognitive bottleneck. Our findings provide granular white-box insights for optimizing the next generation of agentic software engineering.

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@article{li2026from,
  title  = {From Laboratory to Real-World Applications: Benchmarking Agentic Code Reasoning at the Repository Level},
  author = {Jia Li and Yuxin Su and Michael R. Lyu},
  year   = {2026},
  eprint = {2601.03731},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2601.03731v2}
}

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