Bridging Modalities: Joint Synthesis and Registration Framework for Aligning Diffusion MRI with T1-Weighted Images

Xiaofan Wang, Junyi Wang, Yuqian Chen, Lauren J. O' Donnell, Fan Zhang
1/16/2026
eess.IVcs.CV

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Abstract

Multimodal image registration between diffusion MRI (dMRI) and T1-weighted (T1w) MRI images is a critical step for aligning diffusion-weighted imaging (DWI) data with structural anatomical space. Traditional registration methods often struggle to ensure accuracy due to the large intensity differences between diffusion data and high-resolution anatomical structures. This paper proposes an unsupervised registration framework based on a generative registration network, which transforms the original multimodal registration problem between b0 and T1w images into a unimodal registration task between a generated image and the real T1w image. This effectively reduces the complexity of cross-modal registration. The framework first employs an image synthesis model to generate images with T1w-like contrast, and then learns a deformation field from the generated image to the fixed T1w image. The registration network jointly optimizes local structural similarity and cross-modal statistical dependency to improve deformation estimation accuracy. Experiments conducted on two independent datasets demonstrate that the proposed method outperforms several state-of-the-art approaches in multimodal registration tasks.

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@article{wang2026bridging,
  title  = {Bridging Modalities: Joint Synthesis and Registration Framework for Aligning Diffusion MRI with T1-Weighted Images},
  author = {Xiaofan Wang and Junyi Wang and Yuqian Chen and Lauren J. O' Donnell and Fan Zhang},
  year   = {2026},
  eprint = {2601.11689},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2601.11689v1}
}

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