Sequence Diffusion Model for Temporal Link Prediction in Continuous-Time Dynamic Graph

Nguyen Minh Duc, Viet Cuong Ta
1/30/2026
cs.LG

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Abstract

Temporal link prediction in dynamic graphs is a fundamental problem in many real-world systems. Existing temporal graph neural networks mainly focus on learning representations of historical interactions. Despite their strong performance, these models are still purely discriminative, producing point estimates for future links and lacking an explicit mechanism to capture the uncertainty and sequential structure of future temporal interactions. In this paper, we propose SDG, a novel sequence-level diffusion framework that unifies dynamic graph learning with generative denoising. Specifically, SDG injects noise into the entire historical interaction sequence and jointly reconstructs all interaction embeddings through a conditional denoising process, thereby enabling the model to capture more comprehensive interaction distributions. To align the generative process with temporal link prediction, we employ a cross-attention denoising decoder to guide the reconstruction of the destination sequence and optimize the model in an end-to-end manner. Extensive experiments on various temporal graph benchmarks show that SDG consistently achieves state-of-the-art performance in the temporal link prediction task.

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@article{duc2026sequence,
  title  = {Sequence Diffusion Model for Temporal Link Prediction in Continuous-Time Dynamic Graph},
  author = {Nguyen Minh Duc and Viet Cuong Ta},
  year   = {2026},
  eprint = {2601.23233},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2601.23233v1}
}

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