Efficient reduction of stellar contamination and noise in planetary transmission spectra using neural networks

Abstract

Context: JWST has enabled transmission spectroscopy at unprecedented precision, but stellar heterogeneities (spots and faculae) remain a dominant contamination source that can bias atmospheric retrievals if uncorrected. Aims: We present a fast, unsupervised methodology to reduce stellar contamination and instrument-specific noise in exoplanet transmission spectra using denoising autoencoders, improving the reliability of retrieved atmospheric parameters. Methods: We design and train denoising autoencoder architectures on large synthetic datasets of terrestrial (TRAPPIST-1e analogues) and sub-Neptune (K2-18b analogues) planets. Reconstruction quality is evaluated with the $χ^2$ statistic over a wide range of signal-to-noise ratios, and atmospheric retrieval experiments on contaminated spectra are used to compare against standard correction approaches in accuracy and computational cost. Results: The autoencoders reconstruct uncontaminated spectra while preserving key molecular features, even at low S/N. In retrieval tests, pre-processing with denoising autoencoders reduces bias in inferred abundances relative to uncorrected baselines and matches the accuracy of simultaneous stellar-contamination fitting while reducing computational time by a factor of three to six. Conclusions: Denoising autoencoders provide an efficient alternative to conventional correction strategies and are promising components of future atmospheric characterization pipelines for both rocky and gaseous exoplanets.