Physics-Informed Neural Networks for Biological $2\mathrm{D}{+}t$ Reaction-Diffusion Systems

William Lavery, Jodie A. Cochrane, Christian Olesen, Dagim S. Tadele, John T. Nardini +1 more
4/20/2026
cs.LGq-bio.QM

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Abstract

Physics-informed neural networks (PINNs) provide a powerful framework for learning governing equations of dynamical systems from data. Biologically-informed neural networks (BINNs) are a variant of PINNs that preserve the known differential operator structure (e.g., reaction-diffusion) while learning constitutive terms via trainable neural subnetworks, enforced through soft residual penalties. Existing BINN studies are limited to $1\mathrm{D}{+}t$ reaction-diffusion systems and focus on forward prediction, using the governing partial differential equation as a regulariser rather than an explicit identification target. Here, we extend BINNs to $2\mathrm{D}{+}t$ systems within a PINN framework that combines data preprocessing, BINN-based equation learning, and symbolic regression post-processing for closed-form equation discovery. We demonstrate the framework's real-world applicability by learning the governing equations of lung cancer cell population dynamics from time-lapse microscopy data, recovering $2\mathrm{D}{+}t$ reaction-diffusion models from experimental observations. The proposed framework is readily applicable to other spatio-temporal systems, providing a practical and interpretable tool for fast analytic equation discovery from data.

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@article{lavery2026physicsinformed,
  title  = {Physics-Informed Neural Networks for Biological $2\mathrm{D}{+}t$ Reaction-Diffusion Systems},
  author = {William Lavery and Jodie A. Cochrane and Christian Olesen and Dagim S. Tadele and John T. Nardini and Sara Hamis},
  year   = {2026},
  eprint = {2604.18548},
  archivePrefix = {arXiv},
  url    = {http://arxiv.org/abs/2604.18548v1}
}

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