Information Extraction

While storing invoice content as metadata to avoid paper document processing may be the future trend, almost all of daily issued invoices are still printed on paper or generated in digital formats such as PDFs. In this paper, we introduce the OCRMiner system for information extraction from scanned document images which is based on text analysis techniques in combination with layout features to extract indexing metadata of (semi-)structured documents. The system is designed to process the documen...

The incorporation of data analytics in the healthcare industry has made significant progress, driven by the demand for efficient and effective big data analytics solutions. Knowledge graphs (KGs) have proven utility in this arena and are rooted in a number of healthcare applications to furnish better data representation and knowledge inference. However, in conjunction with a lack of a representative KG construction taxonomy, several existing approaches in this designated domain are inadequate an...

With the abundance of data and information in todays time, it is nearly impossible for man, or, even machine, to go through all of the data line by line. What one usually does is to try to skim through the lines and retain the absolutely important information, that in a more formal term is called summarization. Text summarization is an important task that aims to compress lengthy documents or articles into shorter, coherent representations while preserving the core information and meaning. This ...

When extracting structured data from repetitively organized documents, such as dictionaries, directories, or even newspapers, a key challenge is to correctly segment what constitutes the basic text regions for the target database. Traditionally, such a problem was tackled as part of the layout analysis and was mostly based on visual clues for dividing (top-down) approaches. Some agglomerating (bottom-up) approaches started to consider textual information to link similar contents, but they requir...

Research projects, including those focused on cancer, rely on the manual extraction of information from clinical reports. This process is time-consuming and prone to errors, limiting the efficiency of data-driven approaches in healthcare. To address these challenges, Natural Language Processing (NLP) offers an alternative for automating the extraction of relevant data from electronic health records (EHRs). In this study, we focus on lung and breast cancer due to their high incidence and the sign...

The exponential growth in scholarly publications necessitates advanced tools for efficient article retrieval, especially in interdisciplinary fields where diverse terminologies are used to describe similar research. Traditional keyword-based search engines often fall short in assisting users who may not be familiar with specific terminologies. To address this, we present a knowledge graph-based paper search engine for biomedical research to enhance the user experience in discovering relevant que...

Clinical document metadata, such as document type, structure, author role, medical specialty, and encounter setting, is essential for accurate interpretation of information captured in clinical documents. However, vast documentation heterogeneity and drift over time challenge harmonization of document metadata. Automated extraction methods have emerged to coalesce metadata from disparate practices into target schema. This scoping review aims to catalog research on clinical document metadata extr...

We present a new formulation for structured information extraction (SIE) from visually rich documents. We address the limitations of existing IOB tagging and graph-based formulations, which are either overly reliant on the correct ordering of input text or struggle with decoding a complex graph. Instead, motivated by anchor-based object detectors in computer vision, we represent an entity as an anchor word and a bounding box, and represent entity linking as the association between anchor words. ...

Recent advances in multimodal pre-trained models have significantly improved information extraction from visually-rich documents (VrDs), in which named entity recognition (NER) is treated as a sequence-labeling task of predicting the BIO entity tags for tokens, following the typical setting of NLP. However, BIO-tagging scheme relies on the correct order of model inputs, which is not guaranteed in real-world NER on scanned VrDs where text are recognized and arranged by OCR systems. Such reading o...

We propose a Transformer-based approach for information extraction from digitized handwritten documents. Our approach combines, in a single model, the different steps that were so far performed by separate models: feature extraction, handwriting recognition and named entity recognition. We compare this integrated approach with traditional two-stage methods that perform handwriting recognition before named entity recognition, and present results at different levels: line, paragraph, and page. Our...

This research focuses on utilizing natural language processing techniques to predict stock price fluctuations, with a specific interest in early detection of economic, political, social, and technological changes that can be leveraged for capturing market opportunities. The proposed approach includes the identification of salient facts and events from news articles, then use these facts to form tuples with entities which can be used to get summaries of market changes for particular entity and th...

With the continuous growth of large Knowledge Graphs (KGs), extractive KG summarization becomes a trending task. Aiming at distilling a compact subgraph with condensed information, it facilitates various downstream KG-based tasks. In this survey paper, we are among the first to provide a systematic overview of its applications and define a taxonomy for existing methods from its interdisciplinary studies. Future directions are also laid out based on our extensive and comparative review.

Transformer-based Language Models are widely used in Natural Language Processing related tasks. Thanks to their pre-training, they have been successfully adapted to Information Extraction in business documents. However, most pre-training tasks proposed in the literature for business documents are too generic and not sufficient to learn more complex structures. In this paper, we use LayoutLM, a language model pre-trained on a collection of business documents, and introduce two new pre-training ta...

Electronic Health Records (EHRs) hold immense potential for advancing healthcare, offering rich, longitudinal data that combines structured information with valuable insights from unstructured clinical notes. However, the unstructured nature of clinical text poses significant challenges for secondary applications. Traditional methods for structuring EHR free-text data, such as rule-based systems and multi-stage pipelines, are often limited by their time-consuming configurations and inability to ...

Every day, thousands of digital documents are generated with useful information for companies, public organizations, and citizens. Given the impossibility of processing them manually, the automatic processing of these documents is becoming increasingly necessary in certain sectors. However, this task remains challenging, since in most cases a text-only based parsing is not enough to fully understand the information presented through different components of varying significance. In this regard, D...

Automatic analysis of customer data for businesses is an area that is of interest to companies. Business to business data is studied rarely in academia due to the sensitive nature of such information. Applying natural language processing can speed up the analysis of prohibitively large sets of data. This paper addresses this subject and applies sentiment analysis, topic modelling and keyword extraction to a B2B data set. We show that accurate sentiment can be extracted from the notes automatical...

Enterprise documents, such as forms and reports, embed critical information for downstream applications like data archiving, automated workflows, and analytics. Although generalist Vision Language Models (VLMs) perform well on established document understanding benchmarks, their ability to conduct holistic, fine-grained structured extraction across diverse document types and flexible schemas is not well studied. Existing Key Entity Extraction (KEE), Relation Extraction (RE), and Visual Question ...

Clinical decision-making is a fundamental stage in delivering appropriate care to patients. In recent years several decision-making systems designed to aid the clinician in this process have been developed. However, technical solutions currently in use are based on simple regression models and are only able to take into account simple pre-defined multiple-choice features, such as patient age, pre-existing conditions, smoker status, etc. One particular source of patient data, that available decis...

In this paper we present the RuSentRel corpus including analytical texts in the sphere of international relations. For each document we annotated sentiments from the author to mentioned named entities, and sentiments of relations between mentioned entities. In the current experiments, we considered the problem of extracting sentiment relations between entities for the whole documents as a three-class machine learning task. We experimented with conventional machine-learning methods (Naive Bayes, ...

Objective: This study introduces ChatSchema, an effective method for extracting and structuring information from unstructured data in medical paper reports using a combination of Large Multimodal Models (LMMs) and Optical Character Recognition (OCR) based on the schema. By integrating predefined schema, we intend to enable LMMs to directly extract and standardize information according to the schema specifications, facilitating further data entry. Method: Our approach involves a two-stage process...